Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Gm12134-201ENSMUST00000122109 520 ntBASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Hmg20aQ9DC33 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Hmg20aQ9DC33 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.11
Hmg20aQ9DC33 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Hmg20aQ9DC33 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Gm42545-201ENSMUST00000202755 922 ntBASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Hmg20aQ9DC33 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Gm13158-201ENSMUST00000122007 736 ntBASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Hmg20aQ9DC33 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms