Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm8825-201ENSMUST00000182565 998 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm4518-201ENSMUST00000182638 718 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm9172-201ENSMUST00000212092 954 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Ccdc7Q9D541 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ccdc7Q9D541 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ccdc7Q9D541 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ccdc7Q9D541 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ccdc7Q9D541 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms