Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Gm7367-201ENSMUST00000057611 492 ntBASIC17.25■□□□□ 0.35
Cfap53Q9D439 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cfap53Q9D439 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Gm17807-201ENSMUST00000186869 298 ntBASIC17.24■□□□□ 0.35
Cfap53Q9D439 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cfap53Q9D439 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.23■□□□□ 0.35
Cfap53Q9D439 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cfap53Q9D439 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Gm15165-201ENSMUST00000118140 502 ntBASIC17.22■□□□□ 0.35
Cfap53Q9D439 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Cfap53Q9D439 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.22■□□□□ 0.35
Cfap53Q9D439 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.22■□□□□ 0.35
Cfap53Q9D439 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cfap53Q9D439 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap53Q9D439 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms