Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ddx47Q9CWX9 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ddx47Q9CWX9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ddx47Q9CWX9 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ddx47Q9CWX9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm29707-201ENSMUST00000196325 491 ntBASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Timm23-208ENSMUST00000226683 750 ntBASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ddx47Q9CWX9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
Ddx47Q9CWX9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Ddx47Q9CWX9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms