Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Mir3081-201ENSMUST00000175305 84 ntBASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Prob1-201ENSMUST00000097619 3021 ntBASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Khdc3Q9CWU5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Khdc3Q9CWU5 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.08■□□□□ 0
Khdc3Q9CWU5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.07■□□□□ 0
Khdc3Q9CWU5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.07■□□□□ 0
Khdc3Q9CWU5 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Khdc3Q9CWU5 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Rprl3-201ENSMUST00000157400 290 ntBASIC15.06■□□□□ 0
Khdc3Q9CWU5 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.06■□□□□ 0
Khdc3Q9CWU5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.06■□□□□ 0
Khdc3Q9CWU5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.06■□□□□ 0
Khdc3Q9CWU5 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Khdc3Q9CWU5 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms