Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Olfr129-201ENSMUST00000122318 993 ntBASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim11Q99PQ2 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.89■□□□□ 0.46
Trim11Q99PQ2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim11Q99PQ2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trim11Q99PQ2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim11Q99PQ2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Gm44454-201ENSMUST00000198541 138 ntBASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim11Q99PQ2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Trim11Q99PQ2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trim11Q99PQ2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC17.86■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms