Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.39■□□□□ 0.05
Trim16Q99PP9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim16Q99PP9 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Gm27742-201ENSMUST00000184667 60 ntBASIC15.38■□□□□ 0.05
Trim16Q99PP9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.38■□□□□ 0.05
Trim16Q99PP9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.38■□□□□ 0.05
Trim16Q99PP9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Trim16Q99PP9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trim16Q99PP9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.37■□□□□ 0.05
Trim16Q99PP9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim16Q99PP9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Gm14859-201ENSMUST00000117752 357 ntBASIC15.36■□□□□ 0.05
Trim16Q99PP9 Olfr129-201ENSMUST00000122318 993 ntBASIC15.36■□□□□ 0.05
Trim16Q99PP9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim16Q99PP9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Gm21362-201ENSMUST00000194272 928 ntBASIC15.35■□□□□ 0.05
Trim16Q99PP9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.35■□□□□ 0.05
Trim16Q99PP9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Trim16Q99PP9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms