Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gm2272-201ENSMUST00000194903 582 ntBASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.34■□□□□ 0.69
RtcbQ99LF4 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RtcbQ99LF4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RtcbQ99LF4 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Gm23547-201ENSMUST00000158210 271 ntBASIC19.33■□□□□ 0.68
RtcbQ99LF4 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RtcbQ99LF4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm25287-201ENSMUST00000103846 110 ntBASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm22918-201ENSMUST00000103855 110 ntBASIC19.32■□□□□ 0.68
RtcbQ99LF4 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RtcbQ99LF4 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.31■□□□□ 0.68
RtcbQ99LF4 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.31■□□□□ 0.68
RtcbQ99LF4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC19.31■□□□□ 0.68
RtcbQ99LF4 AC140375.2-201ENSMUST00000225283 584 ntBASIC19.31■□□□□ 0.68
RtcbQ99LF4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RtcbQ99LF4 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.31■□□□□ 0.68
RtcbQ99LF4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.3■□□□□ 0.68
RtcbQ99LF4 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Gm27437-201ENSMUST00000183429 107 ntBASIC19.3■□□□□ 0.68
RtcbQ99LF4 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RtcbQ99LF4 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms