Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Haglr-201ENSMUST00000100000 2085 ntBASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cstf1Q99LC2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Gm13365-201ENSMUST00000121188 973 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cstf1Q99LC2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cstf1Q99LC2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cstf1Q99LC2 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cstf1Q99LC2 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms