Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Gm29361-201ENSMUST00000183323 2000 ntBASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcd2Q99JR8 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Gm14057-201ENSMUST00000120631 482 ntBASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd2Q99JR8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm13616-201ENSMUST00000120600 222 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm44335-201ENSMUST00000196879 141 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm44297-201ENSMUST00000198304 141 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm44346-201ENSMUST00000198851 141 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm5312-201ENSMUST00000203728 547 ntBASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd2Q99JR8 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcd2Q99JR8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.78■□□□□ 0.12
Smarcd2Q99JR8 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms