Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Mir3081-201ENSMUST00000175305 84 ntBASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha8Q91Y12 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Asic1-205ENSMUST00000228185 1818 ntBASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdha8Q91Y12 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdha8Q91Y12 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdha8Q91Y12 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms