Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
Pcdhb18Q91Y02 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Gm5682-201ENSMUST00000173402 505 ntBASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Mir3113-201ENSMUST00000175478 76 ntBASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pcdhb18Q91Y02 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb18Q91Y02 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Pcdhb18Q91Y02 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdhb18Q91Y02 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Mir8117-201ENSMUST00000184773 107 ntBASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdhb18Q91Y02 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdhb18Q91Y02 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pcdhb18Q91Y02 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdhb18Q91Y02 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb18Q91Y02 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb18Q91Y02 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdhb18Q91Y02 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms