Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Pcdhb6Q91XZ4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Gm12644-201ENSMUST00000119935 606 ntBASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Pcdhb6Q91XZ4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Pcdhb6Q91XZ4 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.1■□□□□ 0.17
Pcdhb6Q91XZ4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms