Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Pcdhga4Q91XY4 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Gm27459-201ENSMUST00000184860 107 ntBASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Pcdhga4Q91XY4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gm34391-201ENSMUST00000203706 907 ntBASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Pcdhga4Q91XY4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga4Q91XY4 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga4Q91XY4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga4Q91XY4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Pcdhga4Q91XY4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Gm28659-201ENSMUST00000188013 759 ntBASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Pcdhga4Q91XY4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga4Q91XY4 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga4Q91XY4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Pcdhga4Q91XY4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga4Q91XY4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdhga4Q91XY4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms