Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga9Q91XX9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 AW822252-206ENSMUST00000208904 237 ntBASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Gm6376-201ENSMUST00000209407 580 ntBASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.52■□□□□ 0.08
Pcdhga9Q91XX9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga9Q91XX9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga9Q91XX9 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhga9Q91XX9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhga9Q91XX9 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Gm7506-201ENSMUST00000207758 815 ntBASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhga9Q91XX9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.5■□□□□ 0.07
Pcdhga9Q91XX9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Gm4459-201ENSMUST00000118750 468 ntBASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Gm2651-201ENSMUST00000203560 838 ntBASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Pcdhga9Q91XX9 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms