Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gm27459-201ENSMUST00000184860 107 ntBASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gm18195-201ENSMUST00000207604 706 ntBASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps4aQ8VEJ9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Vps4aQ8VEJ9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps4aQ8VEJ9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Gm10052-201ENSMUST00000168019 960 ntBASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Gm7729-201ENSMUST00000050143 801 ntBASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Vps4aQ8VEJ9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Gm37935-201ENSMUST00000192012 982 ntBASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Vps4aQ8VEJ9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms