Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Vps39Q8R5L3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Gm23634-201ENSMUST00000175071 91 ntBASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Vps39Q8R5L3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Asic1-205ENSMUST00000228185 1818 ntBASIC15.74■□□□□ 0.11
Vps39Q8R5L3 AA414768-201ENSMUST00000121924 1257 ntBASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Vps39Q8R5L3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Mir7071-201ENSMUST00000184847 69 ntBASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps39Q8R5L3 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms