Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Gm8097-201ENSMUST00000117903 829 ntBASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sf3a1Q8K4Z5 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Gm42473-201ENSMUST00000201056 2291 ntBASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Gm27741-201ENSMUST00000185060 237 ntBASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Gm6296-201ENSMUST00000222599 943 ntBASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sf3a1Q8K4Z5 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sf3a1Q8K4Z5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Sf3a1Q8K4Z5 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Sf3a1Q8K4Z5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms