Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.47■□□□□ 0.55
Shtn1Q8K2Q9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Mir6990-201ENSMUST00000183724 91 ntBASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Gm5626-201ENSMUST00000222151 1058 ntBASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Shtn1Q8K2Q9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Shtn1Q8K2Q9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shtn1Q8K2Q9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Mir7023-201ENSMUST00000185093 64 ntBASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shtn1Q8K2Q9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Gm18889-201ENSMUST00000174284 929 ntBASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Gm27301-201ENSMUST00000184012 127 ntBASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Shtn1Q8K2Q9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shtn1Q8K2Q9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms