Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cchcr1Q8K2I2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Cchcr1Q8K2I2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Rprl3-201ENSMUST00000157400 290 ntBASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cchcr1Q8K2I2 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cchcr1Q8K2I2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cchcr1Q8K2I2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cchcr1Q8K2I2 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cchcr1Q8K2I2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms