Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
ShfQ8CG80 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.01□□□□□ -0.17
ShfQ8CG80 Gm5587-201ENSMUST00000206270 674 ntBASIC14.01□□□□□ -0.17
ShfQ8CG80 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.01□□□□□ -0.17
ShfQ8CG80 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
ShfQ8CG80 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.01□□□□□ -0.17
ShfQ8CG80 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ShfQ8CG80 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.01□□□□□ -0.17
ShfQ8CG80 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14□□□□□ -0.17
ShfQ8CG80 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ShfQ8CG80 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ShfQ8CG80 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14□□□□□ -0.17
ShfQ8CG80 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Gm25406-201ENSMUST00000157599 105 ntBASIC14□□□□□ -0.17
ShfQ8CG80 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14□□□□□ -0.17
ShfQ8CG80 Gm1818-201ENSMUST00000169406 1184 ntBASIC14□□□□□ -0.17
ShfQ8CG80 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14□□□□□ -0.17
ShfQ8CG80 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
ShfQ8CG80 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ShfQ8CG80 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.99□□□□□ -0.17
ShfQ8CG80 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.99□□□□□ -0.17
ShfQ8CG80 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ShfQ8CG80 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ShfQ8CG80 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.99□□□□□ -0.17
ShfQ8CG80 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
ShfQ8CG80 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ShfQ8CG80 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ShfQ8CG80 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
ShfQ8CG80 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.98□□□□□ -0.17
ShfQ8CG80 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.98□□□□□ -0.17
ShfQ8CG80 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.98□□□□□ -0.17
ShfQ8CG80 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.98□□□□□ -0.17
ShfQ8CG80 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
ShfQ8CG80 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ShfQ8CG80 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms