Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Olfr129-201ENSMUST00000122318 993 ntBASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Ccdc38Q8CDN8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Ccdc38Q8CDN8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ccdc38Q8CDN8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ccdc38Q8CDN8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc38Q8CDN8 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc38Q8CDN8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms