Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Alx1Q8C8B0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Gm8318-201ENSMUST00000182954 872 ntBASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Gm5253-201ENSMUST00000187104 1025 ntBASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Gm9682-201ENSMUST00000197505 556 ntBASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Gm44771-201ENSMUST00000206975 626 ntBASIC18.28■□□□□ 0.52
Alx1Q8C8B0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Alx1Q8C8B0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.27■□□□□ 0.52
Alx1Q8C8B0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Alx1Q8C8B0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.27■□□□□ 0.51
Alx1Q8C8B0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.51
Alx1Q8C8B0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Alx1Q8C8B0 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
Alx1Q8C8B0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Alx1Q8C8B0 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Gm1401-201ENSMUST00000122048 772 ntBASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Gm45167-201ENSMUST00000208007 322 ntBASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Alx1Q8C8B0 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms