Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Uba3Q8C878 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Grk6-207ENSMUST00000225925 2769 ntBASIC16.55■□□□□ 0.24
Uba3Q8C878 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Uba3Q8C878 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.55■□□□□ 0.24
Uba3Q8C878 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Gm27741-201ENSMUST00000185060 237 ntBASIC16.55■□□□□ 0.24
Uba3Q8C878 Gm5864-201ENSMUST00000202263 970 ntBASIC16.55■□□□□ 0.24
Uba3Q8C878 Gm6296-201ENSMUST00000222599 943 ntBASIC16.55■□□□□ 0.24
Uba3Q8C878 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Uba3Q8C878 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Uba3Q8C878 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Uba3Q8C878 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Uba3Q8C878 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Uba3Q8C878 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.53■□□□□ 0.24
Uba3Q8C878 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.53■□□□□ 0.24
Uba3Q8C878 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.53■□□□□ 0.24
Uba3Q8C878 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.53■□□□□ 0.24
Uba3Q8C878 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.53■□□□□ 0.24
Uba3Q8C878 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Uba3Q8C878 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Uba3Q8C878 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.52■□□□□ 0.24
Uba3Q8C878 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Gm6376-201ENSMUST00000209407 580 ntBASIC16.52■□□□□ 0.24
Uba3Q8C878 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Uba3Q8C878 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Uba3Q8C878 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Uba3Q8C878 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Uba3Q8C878 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Uba3Q8C878 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Uba3Q8C878 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Uba3Q8C878 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Uba3Q8C878 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.52■□□□□ 0.23
Uba3Q8C878 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.51■□□□□ 0.23
Uba3Q8C878 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Uba3Q8C878 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Uba3Q8C878 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Uba3Q8C878 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms