Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.03■□□□□ 0.8
Ccdc60Q8C4J0 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Gm11780-201ENSMUST00000136880 516 ntBASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccdc60Q8C4J0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Ccdc60Q8C4J0 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Gm6376-201ENSMUST00000209407 580 ntBASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Rps4l-201ENSMUST00000071745 943 ntBASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Ccdc166-201ENSMUST00000182172 2584 ntBASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccdc60Q8C4J0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Mir8098-201ENSMUST00000184011 137 ntBASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc60Q8C4J0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Gm7669-201ENSMUST00000210184 1603 ntBASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Gm13884-201ENSMUST00000118103 829 ntBASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc60Q8C4J0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc60Q8C4J0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms