Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Usp44Q8C2S0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Gm6376-201ENSMUST00000209407 580 ntBASIC18.36■□□□□ 0.53
Usp44Q8C2S0 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Usp44Q8C2S0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Asic1-205ENSMUST00000228185 1818 ntBASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Gm7862-201ENSMUST00000121461 292 ntBASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Usp44Q8C2S0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Usp44Q8C2S0 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Usp44Q8C2S0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Usp44Q8C2S0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms