Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gm15165-201ENSMUST00000118140 502 ntBASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sh3rf3Q8C120 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Gm12895-201ENSMUST00000122214 226 ntBASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sh3rf3Q8C120 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Gm25745-201ENSMUST00000174945 133 ntBASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sh3rf3Q8C120 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Sh3rf3Q8C120 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms