Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Gm9987-201ENSMUST00000069768 567 ntBASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Slc44a2Q8BY89 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Mir7071-201ENSMUST00000184847 69 ntBASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Gm7213-201ENSMUST00000215977 950 ntBASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slc44a2Q8BY89 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slc44a2Q8BY89 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slc44a2Q8BY89 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms