Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne3Q8BT60 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne3Q8BT60 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne3Q8BT60 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne3Q8BT60 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cpne3Q8BT60 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Gm9013-201ENSMUST00000132939 882 ntBASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Gm10231-201ENSMUST00000181584 441 ntBASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Gm10175-202ENSMUST00000208752 441 ntBASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Cpne3Q8BT60 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Cpne3Q8BT60 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.02
Cpne3Q8BT60 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Cpne3Q8BT60 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Cpne3Q8BT60 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Cpne3Q8BT60 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms