Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Gm42473-201ENSMUST00000201056 2291 ntBASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Rab11fip4Q8BQP8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Rab11fip4Q8BQP8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Rab11fip4Q8BQP8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
Rab11fip4Q8BQP8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Rab11fip4Q8BQP8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Gm6376-201ENSMUST00000209407 580 ntBASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rab11fip4Q8BQP8 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab11fip4Q8BQP8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms