Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Gm13597-201ENSMUST00000121239 375 ntBASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Gm10576-201ENSMUST00000191927 825 ntBASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Gm44872-201ENSMUST00000207864 420 ntBASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smarcal1Q8BJL0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Gm14701-201ENSMUST00000117156 348 ntBASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smarcal1Q8BJL0 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Gm15427-201ENSMUST00000117288 531 ntBASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Gm37171-201ENSMUST00000192636 1185 ntBASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smarcal1Q8BJL0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gm13216-201ENSMUST00000117145 591 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gm5177-201ENSMUST00000183092 997 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smarcal1Q8BJL0 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.64■□□□□ 0.26
Smarcal1Q8BJL0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smarcal1Q8BJL0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms