Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Gm44430-201ENSMUST00000203376 995 ntBASIC15.19■□□□□ 0.02
Rnf38Q8BI21 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf38Q8BI21 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mir770-201ENSMUST00000103252 94 ntBASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Gm11355-201ENSMUST00000121120 306 ntBASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Gm10052-201ENSMUST00000168019 960 ntBASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Gm7729-201ENSMUST00000050143 801 ntBASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf38Q8BI21 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Sybu-209ENSMUST00000228639 4113 ntBASIC15.17■□□□□ 0.02
Rnf38Q8BI21 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rnf38Q8BI21 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rnf38Q8BI21 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms