Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim23Q8BGX0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim23Q8BGX0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gm15358-201ENSMUST00000119249 520 ntBASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gm27646-201ENSMUST00000183989 110 ntBASIC15.14■□□□□ 0.01
Trim23Q8BGX0 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim23Q8BGX0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Gm19164-201ENSMUST00000210667 640 ntBASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim23Q8BGX0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim23Q8BGX0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms