Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Phf7-203ENSMUST00000226565 1971 ntBASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smndc1Q8BGT7 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Smndc1Q8BGT7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smndc1Q8BGT7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Gm2274-201ENSMUST00000184539 609 ntBASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Smndc1Q8BGT7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms