Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.32■□□□□ 0.04
Trim50Q810I2 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trim50Q810I2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim50Q810I2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.31■□□□□ 0.04
Trim50Q810I2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Vti1a-206ENSMUST00000225529 1244 ntBASIC15.31■□□□□ 0.04
Trim50Q810I2 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trim50Q810I2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trim50Q810I2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim50Q810I2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.3■□□□□ 0.04
Trim50Q810I2 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.3■□□□□ 0.04
Trim50Q810I2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.3■□□□□ 0.04
Trim50Q810I2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim50Q810I2 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim50Q810I2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim50Q810I2 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim50Q810I2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Gm9172-201ENSMUST00000212092 954 ntBASIC15.29■□□□□ 0.04
Trim50Q810I2 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.29■□□□□ 0.04
Trim50Q810I2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim50Q810I2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim50Q810I2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.28■□□□□ 0.04
Trim50Q810I2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Trim50Q810I2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim50Q810I2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trim50Q810I2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms