Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trnp1Q80ZI1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Trnp1Q80ZI1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Gm6415-201ENSMUST00000118488 348 ntBASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Gm13823-201ENSMUST00000119930 345 ntBASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trnp1Q80ZI1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm27989-201ENSMUST00000184721 107 ntBASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 AC130669.1-201ENSMUST00000228537 1672 ntBASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trnp1Q80ZI1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Gm18737-201ENSMUST00000173594 937 ntBASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Mir7684-201ENSMUST00000183858 60 ntBASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Gm2423-201ENSMUST00000074863 733 ntBASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trnp1Q80ZI1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trnp1Q80ZI1 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms