Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp6nlQ80XC3 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp6nlQ80XC3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Gm27301-201ENSMUST00000184012 127 ntBASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp6nlQ80XC3 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Usp6nlQ80XC3 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Usp6nlQ80XC3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Mir6956-201ENSMUST00000183598 62 ntBASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Usp6nlQ80XC3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms