Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.2■□□□□ 0.02
Trim36Q80WG7 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trim36Q80WG7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gm28033-201ENSMUST00000184224 96 ntBASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gm17807-201ENSMUST00000186869 298 ntBASIC15.19■□□□□ 0.02
Trim36Q80WG7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.19■□□□□ 0.02
Trim36Q80WG7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trim36Q80WG7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trim36Q80WG7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.18■□□□□ 0.02
Trim36Q80WG7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Trim36Q80WG7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.18■□□□□ 0.02
Trim36Q80WG7 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trim36Q80WG7 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.17■□□□□ 0.02
Trim36Q80WG7 Gm17971-201ENSMUST00000190239 806 ntBASIC15.17■□□□□ 0.02
Trim36Q80WG7 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trim36Q80WG7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim36Q80WG7 Gm11336-201ENSMUST00000118168 334 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms