Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Gm25911-201ENSMUST00000157621 56 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Gm5682-201ENSMUST00000173402 505 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Mir8117-201ENSMUST00000184773 107 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.47□□□□□ -0.09
Pif1Q80SX8 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Gm10175-201ENSMUST00000086013 645 ntBASIC14.47□□□□□ -0.09
Pif1Q80SX8 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pif1Q80SX8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.46□□□□□ -0.09
Pif1Q80SX8 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pif1Q80SX8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pif1Q80SX8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pif1Q80SX8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pif1Q80SX8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pif1Q80SX8 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pif1Q80SX8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.45□□□□□ -0.1
Pif1Q80SX8 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.45□□□□□ -0.1
Pif1Q80SX8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.45□□□□□ -0.1
Pif1Q80SX8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pif1Q80SX8 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.45□□□□□ -0.1
Pif1Q80SX8 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.45□□□□□ -0.1
Pif1Q80SX8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pif1Q80SX8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.44□□□□□ -0.1
Pif1Q80SX8 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pif1Q80SX8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms