Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfx4Q7TNK1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Gm27463-201ENSMUST00000183569 57 ntBASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfx4Q7TNK1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Gm11336-201ENSMUST00000118168 334 ntBASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rfx4Q7TNK1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.09■□□□□ 0.01
Rfx4Q7TNK1 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfx4Q7TNK1 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rfx4Q7TNK1 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
Rfx4Q7TNK1 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms