Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smarcc2Q6PDG5 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Gm7461-201ENSMUST00000058918 827 ntBASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smarcc2Q6PDG5 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smarcc2Q6PDG5 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Gm25745-201ENSMUST00000174945 133 ntBASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smarcc2Q6PDG5 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Gm28659-201ENSMUST00000188013 759 ntBASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smarcc2Q6PDG5 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Smarcc2Q6PDG5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms