Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scube1Q6NZL8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Gm6433-201ENSMUST00000118634 875 ntBASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube1Q6NZL8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Gm27463-201ENSMUST00000183569 57 ntBASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube1Q6NZL8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Gm13559-201ENSMUST00000120476 863 ntBASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Gm24841-201ENSMUST00000158676 357 ntBASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Scube1Q6NZL8 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms