Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Gm10175-202ENSMUST00000208752 441 ntBASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdhga7Q6DD96 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Gm13323-201ENSMUST00000120245 1151 ntBASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Gm6623-201ENSMUST00000173570 544 ntBASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Mir6404-201ENSMUST00000183699 94 ntBASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdhga7Q6DD96 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Asic1-205ENSMUST00000228185 1818 ntBASIC15.27■□□□□ 0.03
Pcdhga7Q6DD96 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Gm5587-201ENSMUST00000206270 674 ntBASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdhga7Q6DD96 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Gm6345-202ENSMUST00000180900 204 ntBASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Pcdhga7Q6DD96 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.24■□□□□ 0.03
Pcdhga7Q6DD96 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms