Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ift88Q61371 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ift88Q61371 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Mir770-201ENSMUST00000103252 94 ntBASIC17.41■□□□□ 0.38
Ift88Q61371 Gm6433-201ENSMUST00000118634 875 ntBASIC17.41■□□□□ 0.38
Ift88Q61371 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC17.41■□□□□ 0.38
Ift88Q61371 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ift88Q61371 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.41■□□□□ 0.38
Ift88Q61371 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ift88Q61371 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ift88Q61371 BC037039-201ENSMUST00000192003 2205 ntBASIC17.41■□□□□ 0.38
Ift88Q61371 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ift88Q61371 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Ift88Q61371 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 Tfap2a-203ENSMUST00000223869 2037 ntBASIC17.4■□□□□ 0.38
Ift88Q61371 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ift88Q61371 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Gm18032-201ENSMUST00000222541 538 ntBASIC17.4■□□□□ 0.38
Ift88Q61371 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Ift88Q61371 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Ift88Q61371 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ift88Q61371 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC17.39■□□□□ 0.38
Ift88Q61371 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ift88Q61371 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.39■□□□□ 0.37
Ift88Q61371 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ift88Q61371 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Ift88Q61371 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.38■□□□□ 0.37
Ift88Q61371 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.38■□□□□ 0.37
Ift88Q61371 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.38■□□□□ 0.37
Ift88Q61371 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Ift88Q61371 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ift88Q61371 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ift88Q61371 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ift88Q61371 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Ift88Q61371 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ift88Q61371 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.37■□□□□ 0.37
Ift88Q61371 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms