Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gm36967-201ENSMUST00000193814 266 ntBASIC13.28□□□□□ -0.28
Scarb1Q61009 Gm44450-201ENSMUST00000199528 114 ntBASIC13.28□□□□□ -0.28
Scarb1Q61009 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.28□□□□□ -0.28
Scarb1Q61009 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Scarb1Q61009 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Scarb1Q61009 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Scarb1Q61009 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.27□□□□□ -0.28
Scarb1Q61009 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Scarb1Q61009 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Scarb1Q61009 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC13.27□□□□□ -0.29
Scarb1Q61009 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.27□□□□□ -0.29
Scarb1Q61009 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Scarb1Q61009 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Scarb1Q61009 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Gm11539-201ENSMUST00000119837 557 ntBASIC13.26□□□□□ -0.29
Scarb1Q61009 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.26□□□□□ -0.29
Scarb1Q61009 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Gm3375-201ENSMUST00000203929 796 ntBASIC13.26□□□□□ -0.29
Scarb1Q61009 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Scarb1Q61009 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.26□□□□□ -0.29
Scarb1Q61009 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Scarb1Q61009 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scarb1Q61009 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Scarb1Q61009 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms