Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Gm6089-201ENSMUST00000197666 938 ntBASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Gm2651-201ENSMUST00000203560 838 ntBASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Tnfaip3Q60769 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Tnfaip3Q60769 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Gm8344-201ENSMUST00000119813 856 ntBASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Mir5131-201ENSMUST00000175426 93 ntBASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Tnfaip3Q60769 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Gm15173-201ENSMUST00000122049 433 ntBASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Tnfaip3Q60769 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms