Protein–RNA interactions for Protein: Q5XF90

Atp13a4, Probable cation-transporting ATPase 13A4, mousemouse

Predictions only

Length 1,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a4Q5XF90 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Birc2-201ENSMUST00000054878 378 ntBASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atp13a4Q5XF90 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atp13a4Q5XF90 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atp13a4Q5XF90 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Atp13a4Q5XF90 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Gm24589-201ENSMUST00000116692 94 ntBASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Gm8097-201ENSMUST00000117903 829 ntBASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Gm8655-201ENSMUST00000221159 852 ntBASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atp13a4Q5XF90 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Gm27459-201ENSMUST00000184860 107 ntBASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Atp13a4Q5XF90 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms