Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scaf1Q5U4C3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22065-201ENSMUST00000103753 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22066-201ENSMUST00000103761 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24932-201ENSMUST00000103763 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24115-201ENSMUST00000103799 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22190-201ENSMUST00000103827 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22191-201ENSMUST00000103831 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24721-201ENSMUST00000103849 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm28018-201ENSMUST00000103869 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm26399-201ENSMUST00000103937 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25349-201ENSMUST00000177728 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm23616-201ENSMUST00000177797 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25871-201ENSMUST00000177816 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24752-201ENSMUST00000178240 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24496-201ENSMUST00000178287 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25649-201ENSMUST00000178476 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25548-201ENSMUST00000178681 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm23147-201ENSMUST00000178841 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm26095-201ENSMUST00000179270 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22171-201ENSMUST00000179283 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm23936-201ENSMUST00000179354 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm22619-201ENSMUST00000179516 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25255-201ENSMUST00000179579 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24755-201ENSMUST00000179691 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm26506-201ENSMUST00000179692 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm25086-201ENSMUST00000179931 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm23243-201ENSMUST00000180047 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24659-201ENSMUST00000180212 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm24169-201ENSMUST00000180244 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm23689-201ENSMUST00000180354 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm27359-201ENSMUST00000184153 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm27785-201ENSMUST00000184268 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm27466-201ENSMUST00000184396 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm27703-201ENSMUST00000184836 110 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm44335-201ENSMUST00000196879 141 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm44297-201ENSMUST00000198304 141 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm44346-201ENSMUST00000198851 141 ntBASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Scaf1Q5U4C3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Gm11745-201ENSMUST00000121669 448 ntBASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scaf1Q5U4C3 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scaf1Q5U4C3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Gm9385-201ENSMUST00000117563 472 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Gm10576-201ENSMUST00000191927 825 ntBASIC20.36■□□□□ 0.85
Scaf1Q5U4C3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms