Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Mir5130-201ENSMUST00000175160 84 ntBASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm45058-201ENSMUST00000205810 766 ntBASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm9987-201ENSMUST00000069768 567 ntBASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav8d-1Q5R1H8 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav8d-1Q5R1H8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8d-1Q5R1H8 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8d-1Q5R1H8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav8d-1Q5R1H8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav8d-1Q5R1H8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms