Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm12527-201ENSMUST00000117967 564 ntBASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Gm11336-201ENSMUST00000118168 334 ntBASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Trav15-1-dv6-1Q5R1D2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms